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Software

Libraries

pyxmolpp2

A C++ python package for MD trajectories processing.
[Github] [PyPI]

bionmr-utils

Collection of our generic scripts.
[Github] [PyPI]

amber-runner

A convenience library to run Amber MD simulations
[Github] [PyPI]

remote-runner

Generic in-house  solution for remote batch task processing

[Github] [PyPI]

Projects

 

2020-pb6 Assemble and run large scale full atom MD simulations of pb6
2020-Nucleosome  Nucleosome
2019-Grb2-Sos1 Force filed parameters and run scripts
2019-GB1-ESR Force filed parameters and run scripts