Laboratory of Biomolecular NMR

FEBS congress, Jerusalem, Israel

Posted: 14.09.2017

Ivan Podkorytov, Sevastyan Rabdano, Olga Rogacheva, Kerstin Kaempf and Dmitri Luzik attended the FEBS congress in Jerusalem, Israel.

Kerstin Kaempf presented short oral talk “Local and global dynamics of intrinsically disordered proteins: a case study of H4 histone tail”.

Ivan Podkorytov presented poster “Detection of flexible portion of protein chain in Sup35NM amyloid fibrils by means of diffusion-filtered NMR experiment”.

Sevastyan Rabdano presented poster “Characterizing the Size of Protein Aggregate Particles Using a Combination of NMR Diffusion Measurements and Dynamic Light Scattering: Case Study of RRM2 Domain from Protein TDP-43”.

Olga Rogacheva presented poster “New linear interaction between charged lysine side chain and carbonyl group in protein structures”.

Dmitry Luzik presented poster “Non-native disulfide bridges in protein-peptide complex and in protein homodimers trigger unfolding and aggregation”.

Tags: Israel, Jerusalem, Kaempf, Luzik, Podkorytov, Rabdano, Rogacheva

Onset of disorder and protein aggregation due to oxidation-induced intermolecular disulfide bonds: case study of RRM2 domain from TDP-43

Posted: 11.09.2017

Rabdano, S. O.; Izmailov, S. A.; Luzik, D. A.; Groves, A.; Podkorytov, I. S.; Skrynnikov, N. R. Onset of Disorder and Protein Aggregation due to Oxidation-Induced Intermolecular Disulfide Bonds: Case Study of RRM2 Domain from TDP-43. Scientific Reports 2017, 7 (1), 11161.

DOI: 10.1038/s41598-017-10574-w.

Tags: Izmailov, Luzik, Podkorytov, Rabdano, Skrynnikov

Non-Native Disulfide Bridges in Protein-Peptide Complex and in Protein Homodimers Trigger Unfolding and Aggregation

Posted: 08.09.2017

Luzik, D. A.; Rabdano, S. O.; Skrynnikov, N. R. Non-Native Disulfide Bridges in Protein-Peptide Complex and in Protein Homodimers Trigger Unfolding and Aggregation. The FEBS Journal 2017, 284 (Suppl. 1), 212.

DOI: 10.1111/febs.14174.

Tags: Luzik, Rabdano, Skrynnikov

New linear interaction between charged lysine side chain and carbonyl group in protein structures

Posted: 08.09.2017

Rogacheva, O. N.; Izmailov, S. A.; Slipchenko, L. V.; Skrynnikov, N. R. Non-Native Disulfide Bridges in Protein-Peptide Complex and in Protein Homodimers Trigger Unfolding and Aggregation. The FEBS Journal 2017, 284 (Suppl. 1), 311.

DOI: 10.1111/febs.14174.

Tags: Izmailov, Rogacheva, Skrynnikov

Characterizing the size of protein aggregate particles using a combination of NMR diffusion measurements and dynamic light scattering: case study of RRM2 domain from protein TDP-43

Posted: 08.09.2017

Rabdano, S.; Podkorytov, I.; Luzik, D.; Skrynnikov, N. Characterizing the Size of Protein Aggregate Particles Using a Combination of NMR Diffusion Measurements and Dynamic Light Scattering: Case Study of RRM2 Domain from Protein TDP-43. The FEBS Journal 2017, 284 (Suppl. 1), 212.

DOI: 10.1111/febs.14174.

Tags: Luzik, Podkorytov, Rabdano, Skrynnikov

Detection of flexible portion of protein chain in Sup35NM amyloid fibrils by means of diffusion-filtered NMR experiment

Posted: 08.09.2017

Podkorytov, I. S.; Belousov, M.; Bondarev, S.; Kaempf, K.; Zhouravleva, G.; et. all Detection of Flexible Portion of Protein Chain in Sup35NM Amyloid Fibrils by Means of Diffusion-Filtered NMR Experiment. The FEBS Journal 2017, 284 (Suppl. 1), 215.

DOI: 10.1111/febs.14174.

Tags: Kaempf, Podkorytov, Skrynnikov

Local and global dynamics of intrinsically disordered proteins: a case study of H4 histone tail

Posted: 08.09.2017

Kaempf, K.; Rabdano, S. O.; Izmailov, S. A.; Groves, A.; Podkorytov, I. S.; Skrynnikov, N. R. Local and Global Dynamics of Intrinsically Disordered Proteins: A Case Study of H4 Histone Tail. The FEBS Journal 2017, 284 (Suppl. 1), 95.

DOI: 10.1111/febs.14171.
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Tags: Izmailov, Kaempf, Podkorytov, Rabdano, Skrynnikov

Simple MD-based model for oxidative folding of peptides and proteins

Posted: 24.08.2017

Izmailov, S. A.; Podkorytov, I. S.; Skrynnikov, N. R. Simple MD-Based Model for Oxidative Folding of Peptides and Proteins. Scientific Reports 2017, 7 (1).

DOI: 10.1038/s41598-017-09229-7.

Tags: Izmailov, Podkorytov, Skrynnikov

Slow Conformational Exchange and Overall Rocking Motion in Ubiquitin Protein Crystals

Posted: 27.07.2017

Kurauskas, V.; Izmailov, S. A.; Rogacheva, O. N.; Hessel, A.; Ayala, I.; Woodhouse, J.; Shilova, A.; Xue, Y.; Yuwen, T.; Coquelle, N.; Colletier, J.-P.; Skrynnikov, N. R.; Schanda, P. Slow Conformational Exchange and Overall Rocking Motion in Ubiquitin Protein Crystals. Nature Communications 2017, 8 (1).

DOI: 10.1038/s41467-017-00165-8.

Tags: Izmailov, Rogacheva, Skrynnikov

Conference of Institute of Translational Biomedicine of SPbSU “Actual Problems of Translational Biomedicine – 2017”

Posted: 16.07.2017

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Nikolai Skrynnikov, Ivan Podkorytov, Dmitry Luzik, Olga Rogacheva, Sevastyan Rabdano, Sergei Izmailov, Ali Shaban and Oleg Mikhailovsky attended the conference of Institute of Translational Biomedicine of SPbSU “Actual Problems of Translational Biomedicine – 2017”, St. Petersburg.

Tags: Izmailov, Luzik, Podkorytov, Rabdano, Rogacheva, Skrynnikov

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