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Posts tagged ‘Rabdano’

FEBS congress, Jerusalem, Israel

Posted: 14.09.2017

Ivan Podkorytov, Sevastyan Rabdano, Olga Rogacheva, Kerstin Kaempf and Dmitri Luzik attended the FEBS congress in Jerusalem, Israel.

Kerstin Kaempf presented short oral talk “Local and global dynamics of intrinsically disordered proteins: a case study of H4 histone tail”.

Ivan Podkorytov presented poster “Detection of flexible portion of protein chain in Sup35NM amyloid fibrils by means of diffusion-filtered NMR experiment”.

Sevastyan Rabdano presented poster “Characterizing the Size of Protein Aggregate Particles Using a Combination of NMR Diffusion Measurements and Dynamic Light Scattering: Case Study of RRM2 Domain from Protein TDP-43”.

Olga Rogacheva presented poster “New linear interaction between charged lysine side chain and carbonyl group in protein structures”.

Dmitry Luzik presented poster “Non-native disulfide bridges in protein-peptide complex and in protein homodimers trigger unfolding and aggregation”.

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Onset of disorder and protein aggregation due to oxidation-induced intermolecular disulfide bonds: case study of RRM2 domain from TDP-43

Posted: 11.09.2017

Rabdano, S. O.; Izmailov, S. A.; Luzik, D. A.; Groves, A.; Podkorytov, I. S.; Skrynnikov, N. R. Onset of Disorder and Protein Aggregation due to Oxidation-Induced Intermolecular Disulfide Bonds: Case Study of RRM2 Domain from TDP-43. Scientific Reports 20177 (1), 11161.

DOI: 10.1038/s41598-017-10574-w.

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Non-Native Disulfide Bridges in Protein-Peptide Complex and in Protein Homodimers Trigger Unfolding and Aggregation

Posted: 08.09.2017

Luzik, D. A.; Rabdano, S. O.; Skrynnikov, N. R. Non-Native Disulfide Bridges in Protein-Peptide Complex and in Protein Homodimers Trigger Unfolding and Aggregation. The FEBS Journal 2017284 (Suppl. 1), 212.

DOI: 10.1111/febs.14174.

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Characterizing the size of protein aggregate particles using a combination of NMR diffusion measurements and dynamic light scattering: case study of RRM2 domain from protein TDP-43

Posted: 08.09.2017

Rabdano, S.; Podkorytov, I.; Luzik, D.; Skrynnikov, N. Characterizing the Size of Protein Aggregate Particles Using a Combination of NMR Diffusion Measurements and Dynamic Light Scattering: Case Study of RRM2 Domain from Protein TDP-43. The FEBS Journal 2017284 (Suppl. 1), 212.

DOI: 10.1111/febs.14174.

(more…)

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Local and global dynamics of intrinsically disordered proteins: a case study of H4 histone tail

Posted: 08.09.2017

Kaempf, K.; Rabdano, S. O.; Izmailov, S. A.; Groves, A.; Podkorytov, I. S.; Skrynnikov, N. R. Local and Global Dynamics of Intrinsically Disordered Proteins: A Case Study of H4 Histone Tail. The FEBS Journal 2017, 284 (Suppl. 1), 95.

DOI: 10.1111/febs.14171.
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Conference of Institute of Translational Biomedicine of SPbSU “Actual Problems of Translational Biomedicine – 2017”

Posted: 16.07.2017

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Nikolai Skrynnikov, Ivan Podkorytov, Dmitry Luzik, Olga Rogacheva, Sevastyan Rabdano, Sergei Izmailov, Ali Shaban and Oleg Mikhailovsky attended the conference of Institute of Translational Biomedicine of SPbSU “Actual Problems of Translational Biomedicine – 2017”, St. Petersburg.

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Spinus 2017 – Magnetic Resonance and Its Applications

Posted: 29.04.2017

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Nikolai Skrynnikov, Vladislav Salikov and Sevastyan Rabdano attended the Spinus 2017 conference “Magnetic Resonance and Its Applications”.

Nikolai Skrynnikov presented the lecture “Recent results from the Laboratory of biomolecular NMR @ SPbGU: from mechanism of anti-cancer peptides to characterization of flexible tails in amyloid fibrils”.

Sevastyan Rabdano presented the oral talk “Reconstruction of particle size-distribution from conjunction of NMR and DLS diffusion data”.

Vladislav Salikov presented porster “Analysis of NMR spectra of alizarin and alizarin red S”.

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TEDxSPBU

Posted: 22.04.2017

Sevastyan Rabdano was invited to give a talk at locally organized TED event TEDxSPBU. The topic of talk was “Can we use negative impact of oxidants in positive way?”

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BioHack 2017

Posted: 05.03.2017

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Sevastyan Rabdano, Sergei Izmailov and Dmitri Luzik took part in bioinformatics hackathon BioHack 2017.

Sergei Izmailov was a leader of a team that worked on the project “Identification of oncogene proteins as targets for covalently binding peptides”.

Dmitry Luzik was in team that worked on the project “Interactome of human proteoforms”.

Sevastyan Rabdano was in team that worked on the project “Research of bound states of water molecules at the interfaces of biomolecules”. His team took third place and received award from organizers.

 

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XXXVIII Finnish NMR Symposium

Posted: 13.06.2016

Finnish NMR symposium

Nikolai Skrynnikov, Ivan Podkorytov, Sergei Izmailov, Olga Rogacheva, Kerstin Kaempf and Sevastyan Rabdano attended XXXVIII Finnish NMR Symposium, Jyvaskyla, Finland.

Nikolai Skrynnikov presented lecture “Dynamics in Protein Crystals: Insights From MD Simulations Complement New Solid-State NMR And X-Ray Data”.

Kerstin Kaempf presented oral talk “Local and global dynamics of intrinsically disordered proteins: a case study of H4 histone tail“.

Ivan Podkorytov presented poster “Diffusion-filtered experiment to detect flexible portion of protein chain in amyloid fibrils: application to Sup35NM“.

Sergei Izmailov presented poster “Simple MD-based model for oxidative folding of peptides and proteins”.

Olga Rogacheva presented poster “Using molecular dynamics simulation and chemical shift prediction to unravel dynamics in different crystal forms of ubiquitin”.

Sevastyan Rabdano presented poster “Loss of protein stability due to formation of intermolecular disulfide bonds under the effect of oxidative stress: case study of the RRM2 domain from neuropathological protein TDP-43”.

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