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Posts tagged ‘Podkorytov’

FEBS congress, Jerusalem, Israel

Posted: 14.09.2017

Ivan Podkorytov, Sevastyan Rabdano, Olga Rogacheva, Kerstin Kaempf and Dmitri Luzik attended the FEBS congress in Jerusalem, Israel.

Kerstin Kaempf presented short oral talk “Local and global dynamics of intrinsically disordered proteins: a case study of H4 histone tail”.

Ivan Podkorytov presented poster “Detection of flexible portion of protein chain in Sup35NM amyloid fibrils by means of diffusion-filtered NMR experiment”.

Sevastyan Rabdano presented poster “Characterizing the Size of Protein Aggregate Particles Using a Combination of NMR Diffusion Measurements and Dynamic Light Scattering: Case Study of RRM2 Domain from Protein TDP-43”.

Olga Rogacheva presented poster “New linear interaction between charged lysine side chain and carbonyl group in protein structures”.

Dmitry Luzik presented poster “Non-native disulfide bridges in protein-peptide complex and in protein homodimers trigger unfolding and aggregation”.

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Onset of disorder and protein aggregation due to oxidation-induced intermolecular disulfide bonds: case study of RRM2 domain from TDP-43

Posted: 11.09.2017

Rabdano, S. O.; Izmailov, S. A.; Luzik, D. A.; Groves, A.; Podkorytov, I. S.; Skrynnikov, N. R. Onset of Disorder and Protein Aggregation due to Oxidation-Induced Intermolecular Disulfide Bonds: Case Study of RRM2 Domain from TDP-43. Scientific Reports 20177 (1), 11161.

DOI: 10.1038/s41598-017-10574-w.

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Characterizing the size of protein aggregate particles using a combination of NMR diffusion measurements and dynamic light scattering: case study of RRM2 domain from protein TDP-43

Posted: 08.09.2017

Rabdano, S.; Podkorytov, I.; Luzik, D.; Skrynnikov, N. Characterizing the Size of Protein Aggregate Particles Using a Combination of NMR Diffusion Measurements and Dynamic Light Scattering: Case Study of RRM2 Domain from Protein TDP-43. The FEBS Journal 2017284 (Suppl. 1), 212.

DOI: 10.1111/febs.14174.

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Detection of flexible portion of protein chain in Sup35NM amyloid fibrils by means of diffusion-filtered NMR experiment

Posted: 08.09.2017

Podkorytov, I. S.; Belousov, M.; Bondarev, S.; Kaempf, K.; Zhouravleva, G.; Dvinskikh, S. V.; Skrynnikov, N. R. Detection of Flexible Portion of Protein Chain in Sup35NM Amyloid Fibrils by Means of Diffusion-Filtered NMR Experiment. The FEBS Journal 2017284 (Suppl. 1), 215.

DOI: 10.1111/febs.14174.

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Local and global dynamics of intrinsically disordered proteins: a case study of H4 histone tail

Posted: 08.09.2017

Kaempf, K.; Rabdano, S. O.; Izmailov, S. A.; Groves, A.; Podkorytov, I. S.; Skrynnikov, N. R. Local and Global Dynamics of Intrinsically Disordered Proteins: A Case Study of H4 Histone Tail. The FEBS Journal 2017, 284 (Suppl. 1), 95.

DOI: 10.1111/febs.14171.
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Simple MD-based model for oxidative folding of peptides and proteins

Posted: 24.08.2017

Izmailov, S. A.; Podkorytov, I. S.; Skrynnikov, N. R. Simple MD-Based Model for Oxidative Folding of Peptides and Proteins. Scientific Reports 20177 (1).

DOI: 10.1038/s41598-017-09229-7.

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Conference of Institute of Translational Biomedicine of SPbSU “Actual Problems of Translational Biomedicine – 2017”

Posted: 16.07.2017

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Nikolai Skrynnikov, Ivan Podkorytov, Dmitry Luzik, Olga Rogacheva, Sevastyan Rabdano, Sergei Izmailov, Ali Shaban and Oleg Mikhailovsky attended the conference of Institute of Translational Biomedicine of SPbSU “Actual Problems of Translational Biomedicine – 2017”, St. Petersburg.

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Posted: 20.01.2017

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Tyuryaeva, I. I., Lyublinskaya, O. G., Podkorytov, I. S. & Skrynnikov, N. R. “Origin of anti-tumor activity of the cysteine-containing GO peptides and further optimization of their cytotoxic properties” Scientific Reports 7, 40217 (2017).

DOI: 10.1038/srep40217

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XXXVIII Finnish NMR Symposium

Posted: 13.06.2016

Finnish NMR symposium

Nikolai Skrynnikov, Ivan Podkorytov, Sergei Izmailov, Olga Rogacheva, Kerstin Kaempf and Sevastyan Rabdano attended XXXVIII Finnish NMR Symposium, Jyvaskyla, Finland.

Nikolai Skrynnikov presented lecture “Dynamics in Protein Crystals: Insights From MD Simulations Complement New Solid-State NMR And X-Ray Data”.

Kerstin Kaempf presented oral talk “Local and global dynamics of intrinsically disordered proteins: a case study of H4 histone tail“.

Ivan Podkorytov presented poster “Diffusion-filtered experiment to detect flexible portion of protein chain in amyloid fibrils: application to Sup35NM“.

Sergei Izmailov presented poster “Simple MD-based model for oxidative folding of peptides and proteins”.

Olga Rogacheva presented poster “Using molecular dynamics simulation and chemical shift prediction to unravel dynamics in different crystal forms of ubiquitin”.

Sevastyan Rabdano presented poster “Loss of protein stability due to formation of intermolecular disulfide bonds under the effect of oxidative stress: case study of the RRM2 domain from neuropathological protein TDP-43”.

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XII International Workshop On Magnetic Resonance, Rostov-on-Don

Posted: 02.03.2015

Sergei Izmailov, Sevastyan Rabdano, Ivan Podkorytov and Nikolai Skrynnikov attended conference “XII International Symposium on Magnetic Resonance (Spectroscopy, Imaging & Ecology)”, Rostov-on-Don, Russia, 2-6 March 2015.

Nikolai Skrynnikov presented lecture “Probing protein dynamics by NMR experiments and MD simulations”.

Sevastyan presented an oral talk “Destabilization of RNA-Recognition Motif RRM2 In Proteinopathic Protein TDP-43 Under the Effect of Oxidative Stress”.

Sergei Izmailov presented a poster entitled “Molecular dynamics simulation of folding of cysteine-containing peptide guanylin with formation of disulfide bonds”

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